Data quality metrics extracted from 3vw9.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3VW9 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
RIGAKU MICROMAX-007 HF
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
IMAGE PLATE
Collection date
_diffrn_detector.pdbx_collection_date
2007-10-27
Detector
_diffrn_detector.type
RIGAKU RAXIS VII
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.5418
Software
Data collection
_software.classification
CrystalClear
Data reduction
_software.classification
XDS
Data scaling
_software.classification
SCALA (3.3.15; 2009/03/31; Phil R. Evans; pre@mrc-lmb.cam.ac.uk)
Phasing
_software.classification
PHASER (2.1.4; Wed Sep 30 11:06:58 2009; Randy J. Read; cimr-phaser@lists.cam.ac.uk)
Refinement #1
_software.classification
BUSTER-TNT (BUSTER 2.11.2; Gerard Bricogne; buster-develop@GlobalPhasing.com)
Refinement #2
_software.classification
BUSTER (2.11.2)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
85.99 66.98 68.53 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54180 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
30.089 30.089 1.510
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.470 6.590 1.470
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.061 0.047 0.280
Rmeas
_reflns_shell.pdbx_Rrim_I_all
- 0.052 0.380
Rpim
_reflns_shell.pdbx_Rpim_I_all
- 0.020 0.254
Total number of observations
_reflns_shell.number_measured_all
- 5206 1801
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
60224 846 1092
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
17.10 11.80 2.80
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
89.3 97.6 22.5
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
5.8 6.2 1.6
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
3VW9
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2012-08-10
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
21.5 - 1.470 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1640 / 0.1928
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDB ENTRY 1QIN