Experiment | |
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Method _exptl.method | X-RAY DIFFRACTION The method used in the experiment. |
Experimental protocol _diffrn_radiation.pdbx_diffrn_protocol | SINGLE WAVELENGTH SINGLE WAVELENGTH, LAUE, or MAD. |
Source type _diffrn_source.source | ROTATING ANODE The general class of the radiation source. |
Source details _diffrn_source.type | RIGAKU MICROMAX-007 HF The make, model or name of the source of radiation. |
Temperature [K] _diffrn.ambient_temp | 100 The mean temperature in kelvins at which the intensities were |
Detector technology _diffrn_detector.detector | IMAGE PLATE The general class of the radiation detector. |
Detector _diffrn_detector.type | RIGAKU RAXIS IV++ The make, model or name of the detector device used. |
Software | |
Data reduction _software.classification | MOSFLM (Andrew G.W. Leslie; andrew@mrc-lmb.cam.ac.uk) The classification of the program according to its |
Data scaling _software.classification | SCALA (3.3.15; 2009/03/31; Phil R. Evans; pre@mrc-lmb.cam.ac.uk) The classification of the program according to its |
Phasing _software.classification | MOLREP (Alexei Vaguine; alexei@ysbl.york.ac.uk) The classification of the program according to its |
Refinement _software.classification | REFMAC (Garib N. Murshudov; garib@ysbl.york.ac.uk) The classification of the program according to its |
General information | |
Spacegroup name _symmetry.space_group_name_H-M | P 61 2 2 Hermann-Mauguin space-group symbol. Note that the |
Unit cell parameters _cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma} | 101.92 Unit-cell length a corresponding to the structure reported in 101.92 Unit-cell length b corresponding to the structure reported in 169.26 Unit-cell length c corresponding to the structure reported in 90.0 Unit-cell angle alpha of the reported structure in degrees. 90.0 Unit-cell angle beta of the reported structure in degrees. 120.0 Unit-cell angle gamma of the reported structure in degrees. |
Wavelength _diffrn_radiation_wavelength.wavelength | NA |
Data quality metrics | Overall | InnerShell | OuterShell |
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Low resolution limit [Å] _reflns.d_resolution_low _reflns_shell.d_res_low | 88.265 The largest value in angstroms for the interplanar spacings | 33.361 The highest value in angstroms for the interplanar spacings | 2.640 The highest value in angstroms for the interplanar spacings |
High resolution limit [Å] _reflns.d_resolution_high _reflns_shell.d_res_high | 2.500 The smallest value in angstroms for the interplanar spacings | 7.910 The smallest value in angstroms for the interplanar spacings | 2.500 The smallest value in angstroms for the interplanar spacings |
Rmerge _reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs | 0.118 The R sym value as a decimal number. | 0.034 The value of Rmerge(I) for reflections classified as 'observed' | 0.466 The value of Rmerge(I) for reflections classified as 'observed' |
Rmeas _reflns_shell.pdbx_Rrim_I_all | - | 0.048 The redundancy-independent merging R factor value Rrim, | 0.572 The redundancy-independent merging R factor value Rrim, |
Rpim _reflns_shell.pdbx_Rpim_I_all | - | 0.030 The precision-indicating merging R factor value Rpim, | 0.244 The precision-indicating merging R factor value Rpim, |
Total number of observations _reflns_shell.number_measured_all | - | 1271 The total number of reflections measured for this | 12660 The total number of reflections measured for this |
Total number unique _reflns.number_obs _reflns_shell.number_unique_all | 17437 The number of reflections in the REFLN list (not the DIFFRN_REFLN | 563 The total number of measured reflections which are symmetry- | 2452 The total number of measured reflections which are symmetry- |
<I/σ(I)> _reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs | 8.10 The mean of the ratio of the intensities to their | 10.20 The ratio of the mean of the intensities of the reflections | 1.60 The ratio of the mean of the intensities of the reflections |
Completeness [%] _reflns.percent_possible_obs _reflns_shell.percent_possible_all | 94.8 The percentage of geometrically possible reflections represented | 87.8 The percentage of geometrically possible reflections represented | 93.7 The percentage of geometrically possible reflections represented |
Multiplicity _reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy | 4.1 Overall redundancy for this data set. | 2.3 Redundancy for the current shell. | 5.2 Redundancy for the current shell. |
CC(1/2) | - | - | - |
Refinement | |
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PDB entry ID _entry.id | 3VV8 |
Deposition date _pdbx_database_status.recvd_initial_deposition_date | 2012-07-17 |
Resolution _refine.ls_d_res_low _refine.ls_d_res_high | 20.0 - 2.500 Å |
Rwork/Rfree _refine.ls_R_factor_R_work _refine.ls_R_factor_R_free | 0.2241 / 0.2866 |
Structure solution method _refine.pdbx_method_to_determine_struct | MOLECULAR REPLACEMENT |
Starting model (for MR) _refine.pdbx_starting_model | WARNING: no starting model (for MR) given |