Experiment | |
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Method _exptl.method | X-RAY DIFFRACTION The method used in the experiment. |
Experimental protocol _diffrn_radiation.pdbx_diffrn_protocol | SINGLE WAVELENGTH SINGLE WAVELENGTH, LAUE, or MAD. |
Source type _diffrn_source.source | SYNCHROTRON The general class of the radiation source. |
Source details _diffrn_source.type | PHOTON FACTORY BEAMLINE AR-NW12A The make, model or name of the source of radiation. |
Synchrotron site _diffrn_source.pdbx_synchrotron_site | Photon Factory Synchrotron site. |
Beamline _diffrn_source.pdbx_synchrotron_beamline | AR-NW12A Synchrotron beamline. |
Temperature [K] _diffrn.ambient_temp | 95 The mean temperature in kelvins at which the intensities were |
Detector technology _diffrn_detector.detector | CCD The general class of the radiation detector. |
Collection date _diffrn_detector.pdbx_collection_date | 2010-10-11 The date of data collection. |
Detector _diffrn_detector.type | ADSC QUANTUM 210 The make, model or name of the detector device used. |
Wavelength(s) [Å] _diffrn_source.pdbx_wavelength_list | 1.000 Comma separated list of wavelengths or wavelength range. |
Software | |
Data reduction _software.classification | MOSFLM (Andrew G.W. Leslie; andrew@mrc-lmb.cam.ac.uk) The classification of the program according to its |
Data scaling _software.classification | SCALA (3.3.16; 2010/01/06; Phil R. Evans; pre@mrc-lmb.cam.ac.uk) The classification of the program according to its |
Phasing _software.classification | PHASER (2.2.1; Tue Aug 24 18:17:37 2010; Randy J. Read; cimr-phaser@lists.cam.ac.uk) The classification of the program according to its |
Refinement _software.classification | REFMAC (Garib N. Murshudov; garib@ysbl.york.ac.uk) The classification of the program according to its |
General information | |
Spacegroup name _symmetry.space_group_name_H-M | C 1 2 1 Hermann-Mauguin space-group symbol. Note that the |
Unit cell parameters _cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma} | 154.21 Unit-cell length a corresponding to the structure reported in 43.21 Unit-cell length b corresponding to the structure reported in 42.38 Unit-cell length c corresponding to the structure reported in 90.00 Unit-cell angle alpha of the reported structure in degrees. 95.49 Unit-cell angle beta of the reported structure in degrees. 90.00 Unit-cell angle gamma of the reported structure in degrees. |
Wavelength _diffrn_radiation_wavelength.wavelength | 1.00000 ÅThe radiation wavelength in angstroms. |
Data quality metrics | Overall | InnerShell | OuterShell |
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Low resolution limit [Å] _reflns.d_resolution_low _reflns_shell.d_res_low | 76.751 The largest value in angstroms for the interplanar spacings | 33.013 The highest value in angstroms for the interplanar spacings | 2.530 The highest value in angstroms for the interplanar spacings |
High resolution limit [Å] _reflns.d_resolution_high _reflns_shell.d_res_high | 2.400 The smallest value in angstroms for the interplanar spacings | 7.590 The smallest value in angstroms for the interplanar spacings | 2.400 The smallest value in angstroms for the interplanar spacings |
Rmerge _reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs | 0.081 The R sym value as a decimal number. | 0.048 The value of Rmerge(I) for reflections classified as 'observed' | 0.336 The value of Rmerge(I) for reflections classified as 'observed' |
Rmeas _reflns_shell.pdbx_Rrim_I_all | - | 0.058 The redundancy-independent merging R factor value Rrim, | 0.395 The redundancy-independent merging R factor value Rrim, |
Rpim _reflns_shell.pdbx_Rpim_I_all | - | 0.032 The precision-indicating merging R factor value Rpim, | 0.206 The precision-indicating merging R factor value Rpim, |
Total number of observations _reflns_shell.number_measured_all | - | 940 The total number of reflections measured for this | 5088 The total number of reflections measured for this |
Total number unique _reflns.number_obs _reflns_shell.number_unique_all | 10065 The number of reflections in the REFLN list (not the DIFFRN_REFLN | 304 The total number of measured reflections which are symmetry- | 1449 The total number of measured reflections which are symmetry- |
<I/σ(I)> _reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs | 10.20 The mean of the ratio of the intensities to their | 12.10 The ratio of the mean of the intensities of the reflections | 2.20 The ratio of the mean of the intensities of the reflections |
Completeness [%] _reflns.percent_possible_obs _reflns_shell.percent_possible_all | 91.9 The percentage of geometrically possible reflections represented | 82.1 The percentage of geometrically possible reflections represented | 91.4 The percentage of geometrically possible reflections represented |
Multiplicity _reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy | 3.5 Overall redundancy for this data set. | 3.1 Redundancy for the current shell. | 3.5 Redundancy for the current shell. |
CC(1/2) | - | - | - |
Refinement | |
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PDB entry ID _entry.id | 3VRW |
Deposition date _pdbx_database_status.recvd_initial_deposition_date | 2012-04-16 |
Resolution _refine.ls_d_res_low _refine.ls_d_res_high | 33.0 - 2.400 Å |
Rwork/Rfree _refine.ls_R_factor_R_work _refine.ls_R_factor_R_free | 0.2178 / 0.2564 |
Structure solution method _refine.pdbx_method_to_determine_struct | MOLECULAR REPLACEMENT |
Starting model (for MR) _refine.pdbx_starting_model | WARNING: no starting model (for MR) given |