Data quality metrics extracted from 7vq9.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 7VQ9 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
LIQUID ANODE
Source details
_diffrn_source.type
BRUKER METALJET
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2021-06-18
Detector
_diffrn_detector.type
Bruker PHOTON III
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.34138
Software
Data reduction
_software.classification
SAINT
Data scaling
_software.classification
Aimless (0.6.3)
Phasing
_software.classification
PHASER
Refinement
_software.classification
REFMAC (5.8.0238)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
111.899 81.308 60.023 90.00 103.46 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.34138 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
35.880 24.510 1.920
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.870 8.990 1.870
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.055 0.036 0.260
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.059 0.039 0.305
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.020 0.013 0.156
Total number of observations
_reflns_shell.number_measured_all
- 3345 7708
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
41757 384 2253
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.pdbx_netI_over_sigmaI_obs
20.80 51.20 4.30
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.7 95.1 83.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
7.4 8.7 3.4
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.999 0.999 0.935

Refinement
PDB entry ID
_entry.id
7VQ9
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2021-10-19
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
35.9 - 1.890 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1422 / 0.1850
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
7CAQ