Data quality metrics extracted from 2vne.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 2VNE at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
MAD
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
BESSY BEAMLINE 14.2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
BESSY
Beamline
_diffrn_source.pdbx_synchrotron_beamline
14.2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2007-11-28
Detector
_diffrn_detector.type
MARRESEARCH
Software
Data reduction
_software.classification
DENZO
Data scaling
_software.classification
SCALEPACK
Refinement
_software.classification
REFMAC (5.2.0019)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 31 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
86.312 86.312 118.361 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97800 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 2.800
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.700 2.700
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.080 0.500
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
13618 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
14.00 2.00
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
96.0 94.1
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
4.6 4.0
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
2VNE
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2008-02-04
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
74.7 - 2.720 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2394 / 0.2848
Structure solution method
_refine.pdbx_method_to_determine_struct
MAD
Starting model
_refine.pdbx_starting_model
NONE