Data quality metrics extracted from 3vkh.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3VKH at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SPRING-8 BEAMLINE BL44XU
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SPring-8
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL44XU
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2011-04-25
Detector
_diffrn_detector.type
RAYONIX MX-225
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9000
Software
Data reduction
_software.classification
HKL-2000
Data scaling
_software.classification
HKL-2000
Phasing
_software.classification
CNS
Refinement
_software.classification
CNS
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
195.726 228.955 201.168 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.90000 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
150.000
High resolution limit [Å]
_reflns.d_resolution_high
3.800
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.078
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
88890
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
31.10
Completeness [%]
_reflns.percent_possible_obs
99.4
Multiplicity
_reflns.pdbx_redundancy
6.0
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
3VKH
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2011-11-16
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
48.8 - 3.800 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2190 / 0.2920
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
3VKG