Data quality metrics extracted from 5vij.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5VIJ at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 19-ID
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
19-ID
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2015-06-12
Detector
_diffrn_detector.type
ADSC QUANTUM 315
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9794
Software
Data reduction
_software.classification
HKL-2000
Data scaling
_software.classification
HKL-2000
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (1.10.1_2155: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
54.886 87.158 122.254 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97940 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
19.980
High resolution limit [Å]
_reflns.d_resolution_high
2.105
Rmerge
_reflns.pdbx_Rsym_value
0.119
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
34022
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
8.78
Completeness [%]
_reflns.percent_possible_obs
98.1
Multiplicity
_reflns.pdbx_redundancy
3.0
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
5VIJ
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-04-16
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
20.0 - 2.105 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1932 / 0.2554
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDB ENTRY 4NF8