Data quality metrics extracted from 3viu.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3VIU at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
MAD
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SPRING-8 BEAMLINE BL26B1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SPring-8
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL26B1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2004-12-23
Detector
_diffrn_detector.type
RIGAKU JUPITER 210
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.979291, 1.0, 0.979541
Software
Data collection
_software.classification
BSS
Data reduction
_software.classification
HKL-2000
Data scaling
_software.classification
HKL-2000
Phasing
_software.classification
SOLVE
Refinement
_software.classification
CNS (1.3)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 2 2 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
94.899 94.563 158.780 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.979291.000000.97954 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
47.280 2.430
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.350 2.350
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.120 0.368
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
29532 2993
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
14.00 2.10
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
97.3 78.2
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
6.1 3.0
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
3VIU
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2011-10-12
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
47.3 - 2.350 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1990 / 0.2600
Structure solution method
_refine.pdbx_method_to_determine_struct
MAD