Data quality metrics extracted from 2vf2.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 2VF2 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I04
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I04
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2007-08-02
Detector
_diffrn_detector.type
ADSC CCD
Software
Data reduction
_software.classification
MOSFLM
Data scaling
_software.classification
SCALA
Phasing
_software.classification
PHASER
Refinement #1
_software.classification
PHENIX
Refinement #2
_software.classification
PHENIX
General information
Spacegroup name
_symmetry.space_group_name_H-M
I 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
82.36 82.46 194.67 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.96800 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
32.400 2.480
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.350 2.350
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.080 0.500
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
24657 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
7.90 1.50
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
96.7 93.6
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.4 3.4
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
2VF2
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2007-10-29
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
32.4 - 2.350 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2120 / 0.2330
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDB ENTRIES 1C4X AND 2OG1