Data quality metrics extracted from 1vdf.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 1VDF at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
ELLIOTT
Temperature [K]
_diffrn.ambient_temp
279
Detector technology
_diffrn_detector.detector
IMAGE PLATE
Collection date
_diffrn_detector.pdbx_collection_date
1994-12-12
Detector
_diffrn_detector.type
MARRESEARCH
Software
Data reduction
_software.classification
MOSFLM
Data scaling #1
_software.classification
SCALA
Data scaling #2
_software.classification
CCP4 (SCALA)
Phasing
_software.classification
MLPHARE
Refinement
_software.classification
TNT
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
38.47 49.47 54.98 90.00 103.84 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54180 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
25.000 2.110
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.050 2.050
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.pdbx_Rsym_value
0.040 0.210
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
12978 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
10.50 3.90
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
97.0 81.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.8 3.8
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
1VDF
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
1996-09-12
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
8.0 - 2.050 Å
Rwork
_refine.ls_R_factor_R_work
0.1760
WARNING: no Rfree given (but Rwork)!?
Structure solution method
_refine.pdbx_method_to_determine_struct
MIRAS