Data quality metrics extracted from 3vbg.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3VBG at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 21-ID-F
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
21-ID-F
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2009-10-09
Detector
_diffrn_detector.type
MARMOSAIC 225 mm CCD
Software
Data reduction
_software.classification
HKL-2000
Data scaling
_software.classification
HKL-2000
Phasing
_software.classification
CNS
Refinement #1
_software.classification
REFMAC (5.6.0117)
Refinement #2
_software.classification
CNS
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 32
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
64.392 64.392 167.587 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
NA

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
30.000 2.900
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.800 2.800
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.053 0.442
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
19100 1897
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
13.00 1.50
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.5 98.9
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.9 3.9
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
3VBG
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2012-01-02
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
30.0 - 2.800 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1822 / 0.2199
Structure solution method
_refine.pdbx_method_to_determine_struct
FOURIER SYNTHESIS
Starting model
_refine.pdbx_starting_model
pdb entry 1RV1