Data quality metrics extracted from 6v9a.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6V9A at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 21-ID-F
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
21-ID-F
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2018-02-06
Detector
_diffrn_detector.type
RAYONIX MX300HE
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9787
Software
Data reduction
_software.classification
HKL-2000
Data scaling
_software.classification
SCALEPACK
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (1.11.1_2575)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
92.231 141.404 228.648 107.998 101.626 90.019
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97870 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
77.260 5.540
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.300 2.300
  Rmerge - -
Rmeas
_reflns.pdbx_Rrim_I_all
0.145 -
Rpim
_reflns.pdbx_Rpim_I_all
0.083 -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
465495 33456
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
4.00 -
Completeness [%]
_reflns.percent_possible_obs
98.0 -
Multiplicity
_reflns.pdbx_redundancy
3.0 -
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.795

Refinement
PDB entry ID
_entry.id
6V9A
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2019-12-13
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
62.5 - 2.300 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2340 / 0.2787
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
5W6J