Data quality metrics extracted from 5v74.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5V74 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRL BEAMLINE BL12-2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL12-2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2015-12-15
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.03317
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
SCALA
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (dev_2650)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 2 2 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
394.34 638.09 642.15 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.03317 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
3.690
High resolution limit [Å]
_reflns.d_resolution_high
3.510
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.013
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
880323
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
3.60
Completeness [%]
_reflns.percent_possible_obs
98.2
Multiplicity
_reflns.pdbx_redundancy
15.8
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
5V74
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-03-17
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
39.9 - 3.510 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2790 / 0.3235
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
EM map