Data quality metrics extracted from 5v6c.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5V6C at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SEALED TUBE
Source details
_diffrn_source.type
OXFORD DIFFRACTION NOVA
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2014-10-03
Detector
_diffrn_detector.type
OXFORD ONYX CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.54
Software
Data reduction
_software.classification
CrysalisPro
Data scaling
_software.classification
Aimless (0.5.27)
Phasing
_software.classification
PHASER (2.5.6)
Refinement
_software.classification
PHENIX
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 2 2 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
90.636 92.664 100.273 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54000 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
16.530
High resolution limit [Å]
_reflns.d_resolution_high
2.200
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.347
Rmeas
_reflns.pdbx_Rrim_I_all
0.375
Rpim
_reflns.pdbx_Rpim_I_all
0.140
Total number of observations
_reflns.pdbx_number_measured_all
154289
Total number unique
_reflns.number_obs
21750
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
7.50
Completeness [%]
_reflns.percent_possible_obs
99.7
Multiplicity
_reflns.pdbx_redundancy
7.1
CC(1/2)
_reflns.pdbx_CC_half
0.978

Refinement
PDB entry ID
_entry.id
5V6C
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-03-16
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
16.5 - 2.200 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1726 / 0.2171
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
1XEZ