Data quality metrics extracted from 3v5s.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3V5S at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 23-ID-B
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
23-ID-B
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2011-06-18
Detector
_diffrn_detector.type
MARMOSAIC 300 mm CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.0063
Software
Data reduction
_software.classification
HKL-2000
Data scaling
_software.classification
HKL-2000
Phasing
_software.classification
PHASES
Refinement
_software.classification
PHENIX (phenix.refine: 1.7.2_869)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 41 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
84.990 84.990 181.634 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00630 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 4.270 3.660
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
3.600 4.160 3.600
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.pdbx_Rsym_value
0.080 0.240 0.870
  Rmeas - - -
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs
8811 - -
  <I/σ(I)> - - -
Completeness [%]
_reflns_shell.percent_possible_all
- 100.0 96.4
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
13.0 14.3 8.0
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
3V5S
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2011-12-16
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
37.2 - 3.500 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2813 / 0.3027
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
3V5U