Experiment | |
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Method _exptl.method | X-RAY DIFFRACTION The method used in the experiment. |
Experimental protocol _diffrn_radiation.pdbx_diffrn_protocol | SINGLE WAVELENGTH SINGLE WAVELENGTH, LAUE, or MAD. |
Source type _diffrn_source.source | ROTATING ANODE The general class of the radiation source. |
Source details _diffrn_source.type | RIGAKU FR-E The make, model or name of the source of radiation. |
Temperature [K] _diffrn.ambient_temp | 100 The mean temperature in kelvins at which the intensities were |
Detector technology _diffrn_detector.detector | CCD The general class of the radiation detector. |
Collection date _diffrn_detector.pdbx_collection_date | 2014-09-30 The date of data collection. |
Detector _diffrn_detector.type | RIGAKU SATURN A200 The make, model or name of the detector device used. |
Wavelength(s) [Å] _diffrn_source.pdbx_wavelength_list | 1.5418 Comma separated list of wavelengths or wavelength range. |
Software | |
Data reduction _software.classification | XDS The classification of the program according to its |
Data scaling _software.classification | XDS The classification of the program according to its |
Phasing _software.classification | PHASER The classification of the program according to its |
Refinement _software.classification | REFMAC (5.8.0258) The classification of the program according to its |
General information | |
Spacegroup name _symmetry.space_group_name_H-M | P 43 Hermann-Mauguin space-group symbol. Note that the |
Unit cell parameters _cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma} | 42.447 Unit-cell length a corresponding to the structure reported in 42.447 Unit-cell length b corresponding to the structure reported in 37.195 Unit-cell length c corresponding to the structure reported in 90.0 Unit-cell angle alpha of the reported structure in degrees. 90.0 Unit-cell angle beta of the reported structure in degrees. 90.0 Unit-cell angle gamma of the reported structure in degrees. |
Wavelength _diffrn_radiation_wavelength.wavelength | 1.54180 ÅThe radiation wavelength in angstroms. |
Data quality metrics | Overall | InnerShell | OuterShell |
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Low resolution limit [Å] _reflns.d_resolution_low _reflns_shell.d_res_low | 23.360 The largest value in angstroms for the interplanar spacings | 23.360 The highest value in angstroms for the interplanar spacings | 1.630 The highest value in angstroms for the interplanar spacings |
High resolution limit [Å] _reflns.d_resolution_high _reflns_shell.d_res_high | 1.600 The smallest value in angstroms for the interplanar spacings | 8.780 The smallest value in angstroms for the interplanar spacings | 1.600 The smallest value in angstroms for the interplanar spacings |
Rmerge _reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs | 0.028 The R value for merging intensities satisfying the observed | 0.021 The value of Rmerge(I) for reflections classified as 'observed' | 0.371 The value of Rmerge(I) for reflections classified as 'observed' |
Rmeas _reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all | 0.030 The redundancy-independent merging R factor value Rrim, | 0.024 The redundancy-independent merging R factor value Rrim, | 0.403 The redundancy-independent merging R factor value Rrim, |
Rpim | - | - | - |
Total number of observations | - | - | - |
Total number unique _reflns.number_obs _reflns_shell.number_unique_obs | 8814 The number of reflections in the REFLN list (not the DIFFRN_REFLN | 60 The total number of measured reflections classified as 'observed' | 438 The total number of measured reflections classified as 'observed' |
<I/σ(I)> _reflns.pdbx_netI_over_sigmaI _reflns_shell.pdbx_netI_over_sigmaI_obs | 43.40 The mean of the ratio of the intensities to their | 101.30 The mean of the ratio of the intensities to their | 5.20 The mean of the ratio of the intensities to their |
Completeness [%] _reflns.percent_possible_obs | 99.9 The percentage of geometrically possible reflections represented | - | - |
Multiplicity _reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy | 7.0 Overall redundancy for this data set. | 5.4 Redundancy for the current shell. | 6.6 Redundancy for the current shell. |
CC(1/2) _reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half | 1.000 The Pearson's correlation coefficient expressed as a decimal value | 0.999 The Pearson's correlation coefficient expressed as a decimal value | 0.914 The Pearson's correlation coefficient expressed as a decimal value |
Refinement | |
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PDB entry ID _entry.id | 6V41 |
Deposition date _pdbx_database_status.recvd_initial_deposition_date | 2019-11-27 |
Resolution _refine.ls_d_res_low _refine.ls_d_res_high | 23.3 - 1.603 Å |
Rwork/Rfree _refine.ls_R_factor_R_work _refine.ls_R_factor_R_free | 0.1917 / 0.2150 |
Structure solution method _refine.pdbx_method_to_determine_struct | MOLECULAR REPLACEMENT |
Starting model (for MR) _refine.pdbx_starting_model | pdb entry 4hae |