Data quality metrics extracted from 5v4m.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5V4M at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
AUSTRALIAN SYNCHROTRON BEAMLINE MX1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Australian Synchrotron
Beamline
_diffrn_source.pdbx_synchrotron_beamline
MX1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2014-06-30
Detector
_diffrn_detector.type
ADSC QUANTUM 210r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9537
Software
Data reduction
_software.classification
iMOSFLM
Data scaling
_software.classification
SCALA
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (1.10.1_2155: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
67.590 79.010 95.821 87.64 73.29 89.97
Wavelength
_diffrn_radiation_wavelength.wavelength
0.95370 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
50.350
High resolution limit [Å]
_reflns.d_resolution_high
2.100
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.129
  Rmeas -
Rpim
_reflns.pdbx_Rpim_I_all
0.061
  Total number of observations -
Total number unique
_reflns.number_obs
106633
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
41.65
Completeness [%]
_reflns.percent_possible_obs
96.3
Multiplicity
_reflns.pdbx_redundancy
5.4
CC(1/2)
_reflns.pdbx_CC_half
0.995

Refinement
PDB entry ID
_entry.id
5V4M
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2017-03-10
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
48.3 - 2.100 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2167 / 0.2440