Data quality metrics extracted from 4v4y.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4V4Y at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SLS BEAMLINE X06SA
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
X06SA
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2005-11-27
Detector
_diffrn_detector.type
MAR CCD 225 mm
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.98016
Software
Data collection
_software.classification
MAR345
Data reduction #1
_software.classification
DENZO (Zbyszek Otwinowski; zbyszek@mix.swmed.edu)
Data reduction #2
_software.classification
HKL-2000
Data scaling #1
_software.classification
SCALEPACK (Zbyszek Otwinowski; zbyszek@mix.swmed.edu)
Data scaling #2
_software.classification
HKL-2000
Phasing
_software.classification
CNS
Refinement
_software.classification
CNS (Axel T. Brunger; axel.brunger@yale.edu)
General information
Spacegroup name
_symmetry.space_group_name_H-M
I 4 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
508.54 508.54 806.29 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.98016 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
300.000
High resolution limit [Å]
_reflns.d_resolution_high
5.500
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.102
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
169350
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
9.40
Completeness [%]
_reflns.percent_possible_obs
99.3
Multiplicity
_reflns.pdbx_redundancy
7.2
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
4V4Y
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2006-06-27
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
300.0 - 5.500 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2430 / 0.3260
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given