Data quality metrics extracted from 3v2l.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3V2L at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ALS BEAMLINE 4.2.2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ALS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
4.2.2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2010-01-29
Detector
_diffrn_detector.type
NOIR-1
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.0
Software
Data collection
_software.classification
Blu-Ice
Data reduction
_software.classification
d*TREK (9.9.7LDz; Mar 18 2009; Jim W. Pflugrath; Jim.Pflugrath@Rigaku.com)
Data scaling
_software.classification
d*TREK (9.9.7LDz; Mar 18 2009; Jim W. Pflugrath; Jim.Pflugrath@Rigaku.com)
Phasing
_software.classification
PHASER (Randy J. Read; cimr-phaser@lists.cam.ac.uk)
Refinement
_software.classification
REFMAC (5.5.0109; Garib N. Murshudov; garib@ysbl.york.ac.uk)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
34.577 38.229 89.912 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
38.230 38.230 1.660
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.600 3.450 1.600
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.082 0.077 0.429
  Rmeas - - -
  Rpim - - -
Total number of observations
_reflns_shell.number_measured_all
- 6772 6679
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
11263 1659 1598
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
7.70 18.20 2.50
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.8 94.4 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
4.1 4.0 4.2
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
3V2L
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2011-12-12
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
34.0 - 1.800 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1942 / 0.2423
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given