Data quality metrics extracted from 7uyd.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 7UYD at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 17-ID
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
17-ID
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2014-11-26
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
Aimless (0.3.6)
Phasing
_software.classification
BUSTER
Refinement
_software.classification
BUSTER (2.11.5)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
102.652 78.957 67.764 90.00 130.52 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
55.500 55.500 1.070
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.000 2.820 1.000
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.049 0.035 0.361
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.058 0.042 0.438
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.031 0.022 0.246
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
701529 31980 109969
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
217945 9847 38036
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.pdbx_netI_over_sigmaI_obs
15.20 42.60 3.10
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.0 98.7 94.6
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.2 3.2 2.9
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.998 0.997 0.844

Refinement
PDB entry ID
_entry.id
7UYD
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2022-05-06
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
14.6 - 1.000 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1473 / 0.1605
Structure solution method
_refine.pdbx_method_to_determine_struct
FOURIER SYNTHESIS