Data quality metrics extracted from 7urp.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 7URP at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 21-ID-D
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
21-ID-D
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2018-09-10
Detector
_diffrn_detector.type
RAYONIX MX300-HS
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
.729
Software
Data reduction
_software.classification
HKL-2000
Data scaling
_software.classification
xia2
Phasing
_software.classification
PHASER
Refinement
_software.classification
REFMAC (5.8.0267)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
120.57 30.05 49.94 90.00 94.53 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.72900 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
30.100 30.050 1.060
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.030 4.610 1.030
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.080 - 0.056
  Rmeas - - -
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
87298 1028 6377
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
12.00 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.6 95.4 98.3
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
13.4 12.7 8.7
CC(1/2)
_reflns_shell.pdbx_CC_half
- - 0.420

Refinement
PDB entry ID
_entry.id
7URP
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2022-04-22
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
30.1 - 1.030 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1425 / 0.1647
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD