Data quality metrics extracted from 6uml.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6UML at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 31-ID
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
31-ID
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2019-02-06
Detector
_diffrn_detector.type
DECTRIS PILATUS3 S 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97931
Software
Data reduction
_software.classification
xia2
Data scaling
_software.classification
DIALS
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (1.16_3549)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
77.409 127.725 110.174 90.000 109.694 90.000
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97931 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
38.700 3.640
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
3.580 3.580
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.164 0.570
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.195 0.673
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.104 0.355
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
23629 2336
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
5.04 -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.4 98.1
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.4 3.5
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.964 0.734

Refinement
PDB entry ID
_entry.id
6UML
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2019-10-09
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
38.7 - 3.580 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2038 / 0.2671
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
4TZ4