Data quality metrics extracted from 7udd.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 7UDD at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 19-ID
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
19-ID
Temperature [K]
_diffrn.ambient_temp
150
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2009-06-24
Detector
_diffrn_detector.type
ADSC QUANTUM 315r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9184
Software
Data reduction
_software.classification
d*TREK
Data scaling
_software.classification
d*TREK (9.9.9.8L)
Phasing
_software.classification
REFMAC
Refinement
_software.classification
REFMAC (5.8.0267)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
44.25 51.14 92.70 91.92 103.06 109.64
Wavelength
_diffrn_radiation_wavelength.wavelength
0.91840 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
19.960 19.950 1.140
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.100 2.370 1.100
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.055 0.033 0.556
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.064 0.038 0.641
Rpim
_reflns_shell.pdbx_Rpim_I_all
- - 0.321
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
283364 28815 27478
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
8.20 28.40 1.10
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
94.3 95.8 91.3
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
4.0 4.0 4.0
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
7UDD
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2022-03-18
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
20.0 - 1.100 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1343 / 0.1603
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
7ua6