Data quality metrics extracted from 7ud0.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 7UD0 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
CHESS BEAMLINE A1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
CHESS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
A1
Temperature [K]
_diffrn.ambient_temp
298
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2021-04-12
Detector
_diffrn_detector.type
DECTRIS EIGER2 S 16M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.1271
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XSCALE
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (1.17.1)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
74.0 123.0 81.0 90.0 116.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.12710 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
19.840
High resolution limit [Å]
_reflns.d_resolution_high
3.500
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.649
Rmeas
_reflns.pdbx_Rrim_I_all
0.658
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
14881
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
5.90
Completeness [%]
_reflns.percent_possible_obs
89.8
Multiplicity
_reflns.pdbx_redundancy
47.4
CC(1/2)
_reflns.pdbx_CC_half
0.269

Refinement
PDB entry ID
_entry.id
7UD0
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2022-03-17
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
19.8 - 3.500 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2510 / 0.2940
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
4GU5