Data quality metrics extracted from 4uby.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4UBY at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 23-ID-B
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
23-ID-B
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2011-10-20
Detector
_diffrn_detector.type
MARMOSAIC 300 mm CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.7749
Software
Data reduction #1
_software.classification
HKL-2000
Data reduction #2
_software.classification
DENZO
Data scaling #1
_software.classification
HKL-2000
Data scaling #2
_software.classification
SCALEPACK
Phasing
_software.classification
SHELX
Refinement
_software.classification
PHENIX (phenix.refine: 1.9_1692)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
11.666 17.145 19.073 79.76 86.51 90.20
Wavelength
_diffrn_radiation_wavelength.wavelength
0.77490 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 50.000 1.040
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.000 2.150 1.000
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.062 0.058 0.101
  Rmeas - - -
  Rpim - - -
Total number of observations
_reflns.pdbx_number_measured_all
18020 - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
6346 705 455
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
24.60 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
80.9 89.9 57.6
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
2.8 3.4 1.9
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
4UBY
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2014-08-13
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
13.8 - 1.000 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1201 / 0.1577
Structure solution method
_refine.pdbx_method_to_determine_struct
AB INITIO PHASING