Data quality metrics extracted from 3ubt.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3UBT at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 24-ID-E
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
24-ID-E
Collection date
_diffrn_detector.pdbx_collection_date
2008-11-13
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9792
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XSCALE (Wolfgang Kabsch)
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (1.6.4_486; Paul D. Adams; PDAdams@lbl.gov)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
57.564 129.588 132.381 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97920 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
17.000 17.000 2.600
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.500 5.340 2.500
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.122 0.068 0.370
  Rmeas - - -
  Rpim - - -
Total number of observations
_reflns_shell.number_measured_obs
- 12206 9344
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
31721 3826 3805
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
7.93 11.05 3.41
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
90.4 87.5 70.4
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.4 3.2 2.5
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
3UBT
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2011-10-24
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
17.0 - 2.502 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1822 / 0.2212
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given