Data quality metrics extracted from 7u70.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 7U70 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 22-ID
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
22-ID
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2020-07-07
Detector
_diffrn_detector.type
DECTRIS EIGER X 16M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1
Software
Data reduction
_software.classification
HKL-2000 (Zbyszek Otwinowski; hkl@hkl-xray.com)
Data scaling
_software.classification
HKL-2000 (Zbyszek Otwinowski; hkl@hkl-xray.com)
Phasing
_software.classification
PHASER (2.8.3; Fri Jun 28 00:53:49 2019 (svn 8442) (git 7464, 94b2146... ); Randy J. Read; cimr-phaser@lists.cam.ac.uk)
Refinement
_software.classification
PHENIX (1.16_3549)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
45.25 106.80 47.73 90.00 101.84 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
46.715 46.715 1.430
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.360 4.300 1.360
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.063 0.044 0.213
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.075 0.052 0.258
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.040 0.027 0.142
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
305381 10919 42330
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
92146 3072 13316
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
11.40 12.80 3.20
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
97.2 100.0 96.5
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.3 3.6 3.2
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
7U70
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2022-03-07
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
46.7 - 1.360 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1507 / 0.1711
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
1YLT