Data quality metrics extracted from 6u7d.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6U7D at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
AUSTRALIAN SYNCHROTRON BEAMLINE MX1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Australian Synchrotron
Beamline
_diffrn_source.pdbx_synchrotron_beamline
MX1
Temperature [K]
_diffrn.ambient_temp
193
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2018-05-02
Detector
_diffrn_detector.type
ADSC QUANTUM 210r
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.953695
Software
Data reduction
_software.classification
iMOSFLM
Data scaling
_software.classification
SCALA
Phasing
_software.classification
PHENIX
Refinement
_software.classification
REFMAC (5.8.0238)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 2 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
64.31 69.94 74.25 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.95369 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
47.380 3.180
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
3.000 3.000
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.070 0.844
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.265 0.879
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.095 0.228
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
7132 1130
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
10.70 -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
100.0 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
14.2 14.5
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.992 0.903

Refinement
PDB entry ID
_entry.id
6U7D
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2019-09-02
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
47.4 - 3.000 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1982 / 0.3138
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
6OKJ