Data quality metrics extracted from 7u63.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 7U63 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ALS BEAMLINE 5.0.2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ALS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
5.0.2
Temperature [K]
_diffrn.ambient_temp
80
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2019-09-19
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1
Software
Data reduction
_software.classification
HKL-2000
Data scaling
_software.classification
SCALEPACK
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (1.19.2_4158)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
67.624 67.989 85.623 69.13 67.60 68.64
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 50.000 2.280
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.240 6.080 2.240
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.034 0.030 0.383
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.049 0.042 0.542
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.034 0.030 0.383
Total number of observations
_reflns.pdbx_number_measured_all
103835 - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
59023 2933 2898
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
14.40 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
97.4 97.1 96.6
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
1.8 1.8 1.6
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.997 0.716

Refinement
PDB entry ID
_entry.id
7U63
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2022-03-03
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
42.9 - 2.300 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2257 / 0.2822
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
3TT1