Data quality metrics extracted from 7u48.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 7U48 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ALS BEAMLINE 5.0.3
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ALS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
5.0.3
Temperature [K]
_diffrn.ambient_temp
80
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2021-04-13
Detector
_diffrn_detector.type
DECTRIS PILATUS3 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1
Software
Data reduction
_software.classification
HKL-2000
Data scaling
_software.classification
HKL-2000
Phasing
_software.classification
PHENIX
Refinement
_software.classification
PHENIX (1.17.1_3660)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
170.692 50.976 106.699 90.00 113.23 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 50.000 1.700
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.670 4.530 1.670
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.154 0.104 1.224
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.185 0.125 1.590
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.101 0.069 1.002
Total number of observations
_reflns.pdbx_number_measured_all
252076 - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
83707 5145 829
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
4.10 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
84.7 99.9 16.9
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.0 3.3 1.7
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.969 0.253

Refinement
PDB entry ID
_entry.id
7U48
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2022-02-28
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
49.0 - 1.670 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2502 / 0.2853
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
4HBT