Data quality metrics extracted from 4u4j.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4U4J at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE ID29
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
ID29
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2013-12-16
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M-F
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97939
Software
Data reduction #1
_software.classification
XDS
Data reduction #2
_software.classification
XSCALE
Data scaling
_software.classification
XSCALE
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (phenix.refine: 1.8.4_1496)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
254.24 82.16 98.90 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97939 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
58.989 58.989 2.980
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.900 12.970 2.900
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.082 0.035 0.963
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.089 0.039 1.045
  Rpim - - -
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_obs
307501 3229 22535
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
46790 606 3358
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
13.97 31.41 1.93
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.8 97.9 98.7
Multiplicity
_reflns.pdbx_redundancy
6.6 - -
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
4U4J
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2014-07-23
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
59.0 - 2.900 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2436 / 0.2841
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
4U48