Data quality metrics extracted from 7u28.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 7U28 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 17-ID
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
17-ID
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2022-02-06
Detector
_diffrn_detector.type
DECTRIS EIGER X 9M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1
Software
Data reduction
_software.classification
autoPROC
Data scaling
_software.classification
STARANISO
Phasing
_software.classification
BUSTER
Refinement
_software.classification
BUSTER (2.11.8)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
45.551 53.795 114.891 90.00 102.13 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
112.330 1.780
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.680 1.680
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.064 0.595
  Rmeas - -
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.041 0.454
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
46261 2314
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
10.50 -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
74.2 46.4
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.4 2.6
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.998 0.601

Refinement
PDB entry ID
_entry.id
7U28
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2022-02-23
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
112.3 - 1.679 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2080 / 0.2476
Structure solution method
_refine.pdbx_method_to_determine_struct
FOURIER SYNTHESIS