Data quality metrics extracted from 5u0u.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5U0U at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 24-ID-E
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
24-ID-E
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2016-10-27
Detector
_diffrn_detector.type
ADSC QUANTUM 315
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97925
Software
Data reduction #1
_software.classification
HKL-2000
Data reduction #2
_software.classification
DENZO
Data scaling #1
_software.classification
HKL-2000
Data scaling #2
_software.classification
SCALEPACK
Phasing #1
_software.classification
PHASER (2.5.7)
Phasing #2
_software.classification
PARROT
Model building
_software.classification
Coot
Refinement
_software.classification
PHENIX (1.8.2_1309)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
156.873 111.284 89.134 90.00 120.46 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97925 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
49.851 50.000 3.480
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
3.420 9.260 3.420
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.184 0.089 0.652
Rmeas
_reflns.pdbx_Rrim_I_all
0.233 - -
Rpim
_reflns.pdbx_Rpim_I_all
0.140 - -
Total number of observations
_reflns.pdbx_number_measured_all
32526 - -
Total number unique
_reflns.number_obs
14420 - -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
3.80 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
81.5 75.5 85.5
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
2.3 2.4 2.2
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.971 0.503

Refinement
PDB entry ID
_entry.id
5U0U
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-11-27
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
49.9 - 3.428 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2536 / 0.2820
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
5TQA