Data quality metrics extracted from 4u0d.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4U0D at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I04-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I04-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2014-01-20
Detector
_diffrn_detector.type
DECTRIS PILATUS 2M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.92
Software
Data reduction
_software.classification
iMOSFLM
Data scaling
_software.classification
Aimless (0.2.7)
Phasing
_software.classification
PHASER
Refinement
_software.classification
REFMAC (5.8.0073)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
135.38 138.06 211.85 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.92000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
46.070 46.070 3.060
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
3.000 15.300 3.000
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.101 0.021 0.664
  Rmeas - - -
Rpim
_reflns_shell.pdbx_Rpim_I_all
- 0.014 0.436
Total number of observations
_reflns_shell.number_measured_all
- 2154 13499
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
77432 651 4390
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
8.60 33.80 1.70
Completeness [%]
_reflns_shell.percent_possible_all
- 95.1 97.3
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.2 3.3 3.1
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.999 0.577

Refinement
PDB entry ID
_entry.id
4U0D
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2014-07-11
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
115.7 - 3.000 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2457 / 0.2670
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
3H47