Data quality metrics extracted from 5ty4.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5TY4 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
ELECTRON CRYSTALLOGRAPHY
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ELECTRON MICROSCOPE
Source details
_diffrn_source.type
OTHER
Temperature [K]
_diffrn.ambient_temp
293
Detector technology
_diffrn_detector.detector
CMOS
Collection date
_diffrn_detector.pdbx_collection_date
2016-05-04
Detector
_diffrn_detector.type
TVIPS TEMCAM-F416
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.0250793397
Software
Data reduction
_software.classification
MOSFLM (7.1.0)
Data scaling
_software.classification
Aimless (0.5.27)
Phasing
_software.classification
PHASER (2.6.0)
Refinement
_software.classification
PHENIX (1.10)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
41.530 71.330 79.508 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.02508 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
26.640
High resolution limit [Å]
_reflns.d_resolution_high
2.900
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.293
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
3884
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
3.30
Completeness [%]
_reflns.percent_possible_obs
71.9
Multiplicity
_reflns.pdbx_redundancy
3.8
CC(1/2)
_reflns.pdbx_CC_half
0.951

Refinement
PDB entry ID
_entry.id
5TY4
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-11-18
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
26.6 - 2.900 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2919 / 0.3280
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
PDB entry 1KTZ