Data quality metrics extracted from 5txv.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5TXV at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 24-ID-E
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
24-ID-E
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2011-02-11
Detector
_diffrn_detector.type
ADSC QUANTUM 315
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.979
Software
Data collection
_software.classification
ADSC
Data reduction #1
_software.classification
HKL-2000
Data reduction #2
_software.classification
DENZO
Data scaling #1
_software.classification
HKL-2000
Data scaling #2
_software.classification
SCALEPACK
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
86.497 420.860 176.418 90.00 98.56 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97900 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 50.000 7.220
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
7.086 18.940 7.100
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.105 0.054 0.694
  Rmeas - - -
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs
18657 - -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
6.20 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.9 97.4 92.6
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
4.5 4.0 4.5
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.995 0.707

Refinement
PDB entry ID
_entry.id
5TXV
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-11-17
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
49.2 - 7.086 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2737 / 0.2980
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
1HQY