Data quality metrics extracted from 6tsp.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6TSP at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE ID29
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
ID29
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2013-03-01
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.28242
Software
Data reduction
_software.classification
XDS (Mar 15, 2019 BUILT=20190315)
Data scaling
_software.classification
XDS (Mar 15, 2019 BUILT=20190315)
Phasing
_software.classification
PHASER (7.0.078)
Refinement
_software.classification
REFMAC (7.0.078)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 63 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
121.071 121.071 99.624 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.28242 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
46.400 1.880
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.850 1.850
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.066 1.437
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.073 1.767
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.031 0.986
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
64833 1507
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
18.20 -
Completeness [%]
_reflns.percent_possible_obs
88.2 -
Multiplicity
_reflns.pdbx_redundancy
4.4 -
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.999 0.489

Refinement
PDB entry ID
_entry.id
6TSP
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2019-12-21
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
46.4 - 1.850 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2068 / 0.2347
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
3EF2