Data quality metrics extracted from 6tsn.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6TSN at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ESRF BEAMLINE ID23-2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ESRF
Beamline
_diffrn_source.pdbx_synchrotron_beamline
ID23-2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2012-07-16
Detector
_diffrn_detector.type
MARMOSAIC 225 mm CCD
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.8726
Software
Data reduction
_software.classification
XDS (22-Sep-2015)
Data scaling
_software.classification
XDS (22-Sep-2015)
Phasing
_software.classification
REFMAC (7.0.078)
Refinement
_software.classification
REFMAC (7.0.078)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 63 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
121.615 121.615 100.032 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.87260 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
46.600 1.630
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.600 1.600
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.127 1.749
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.145 2.359
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.051 1.572
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
104686 2154
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
14.10 -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
94.8 77.6
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.9 2.9
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.998 0.265

Refinement
PDB entry ID
_entry.id
6TSN
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2019-12-20
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
46.6 - 1.600 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1852 / 0.2091
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
3EF2