Data quality metrics extracted from 5tpz.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5TPZ at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
NSLS BEAMLINE X25
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
NSLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
X25
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2010-06-12
Detector
_diffrn_detector.type
ADSC QUANTUM 315
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.00
Software
Data collection
_software.classification
HKL-2000
Data reduction #1
_software.classification
HKL-2000
Data reduction #2
_software.classification
DENZO
Data scaling #1
_software.classification
HKL-2000
Data scaling #2
_software.classification
SCALEPACK
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (1.10_2155)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 61 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
75.782 75.782 548.556 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverall
Low resolution limit [Å]
_reflns.d_resolution_low
37.891
High resolution limit [Å]
_reflns.d_resolution_high
3.090
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.093
  Rmeas -
  Rpim -
  Total number of observations -
Total number unique
_reflns.number_obs
18198
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
13.00
Completeness [%]
_reflns.percent_possible_obs
98.6
Multiplicity
_reflns.pdbx_redundancy
5.2
  CC(1/2) -

Refinement
PDB entry ID
_entry.id
5TPZ
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-10-21
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
37.9 - 3.095 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2404 / 0.3001
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
3QEL