Data quality metrics extracted from 4tpo.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 4TPO at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SSRL BEAMLINE BL12-2
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SSRL
Beamline
_diffrn_source.pdbx_synchrotron_beamline
BL12-2
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2013-12-11
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.9537
Software
Data scaling
_software.classification
SCALA (3.3.21; 2013/01/04; Phil R. Evans; pre@mrc-lmb.cam.ac.uk)
Refinement
_software.classification
REFMAC (5.8.0069)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
65.832 79.657 112.554 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.95370 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
65.021 37.687 1.290
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.225 3.870 1.225
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.126 0.119 0.995
Rmeas
_reflns.pdbx_Rrim_I_all
0.148 - -
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.075 0.071 0.654
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
612659 20874 68503
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
170299 5730 22690
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
5.60 4.30 0.80
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.0 97.9 90.1
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.6 3.6 3.0
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
4TPO
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2014-06-08
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
65.0 - 1.225 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1379 / 0.1603