Data quality metrics extracted from 5tnu.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5TNU at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
ALS BEAMLINE 12.3.1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
ALS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
12.3.1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2015-02-22
Detector
_diffrn_detector.type
ADSC QUANTUM 315
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.0
Software
Data reduction
_software.classification
MOSFLM (7.2.0)
Data scaling
_software.classification
Aimless (0.5.12)
Phasing #1
_software.classification
PHASER (2.5.7)
Phasing #2
_software.classification
DM (6.5.013)
Model building
_software.classification
Coot (0.8.1)
Refinement
_software.classification
REFMAC (5.8.0158)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 43 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
160.922 160.922 122.960 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
29.880 29.880 3.210
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
3.050 9.640 3.050
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.374 0.065 2.904
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.382 0.066 2.967
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.078 0.014 0.609
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
740378 24703 105244
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
31341 1080 4504
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.pdbx_netI_over_sigmaI_obs
11.20 33.80 2.00
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.9 96.7 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
23.6 22.9 23.4
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.996 0.999 0.629

Refinement
PDB entry ID
_entry.id
5TNU
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-10-14
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
29.9 - 3.050 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1961 / 0.2260
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
2FWR