Data quality metrics extracted from 5tma.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5TMA at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
ROTATING ANODE
Source details
_diffrn_source.type
BRUKER AXS MICROSTAR
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2016-08-31
Detector
_diffrn_detector.type
Bruker Platinum 135
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.54188
Software
Data reduction
_software.classification
PROTEUM PLUS
Data scaling
_software.classification
PROTEUM PLUS
Model building
_software.classification
Coot
Refinement
_software.classification
REFMAC (5.8.0155)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 43 21 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
124.440 124.440 173.825 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.54188 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
101.180 1.700
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.670 1.670
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.072 0.787
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs
157603 -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
16.57 16.57
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.8 98.6
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
10.4 5.0
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
5TMA
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-10-12
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
101.2 - 1.670 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1704 / 0.2027
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
2wvg