Data quality metrics extracted from 6th5.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6TH5 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
BESSY BEAMLINE 14.1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
BESSY
Beamline
_diffrn_source.pdbx_synchrotron_beamline
14.1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2012-03-15
Detector
_diffrn_detector.type
RAYONIX MX-225
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.918410
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
Aimless
Phasing
_software.classification
PHASER
Refinement
_software.classification
PHENIX (1.17.1_3660)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
61.356 46.670 68.583 90.000 92.258 90.000
Wavelength
_diffrn_radiation_wavelength.wavelength
0.91841 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
34.260 2.061
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.990 1.990
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.115 0.665
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.151 0.879
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.098 0.570
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
26211 4465
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
6.59 1.29
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
97.4 98.5
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
2.2 1.9
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.987 0.845

Refinement
PDB entry ID
_entry.id
6TH5
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2019-11-18
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
34.3 - 1.990 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1993 / 0.2383
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
2BTW