Data quality metrics extracted from 5t9y.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5T9Y at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
CLSI BEAMLINE 08ID-1
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
CLSI
Beamline
_diffrn_source.pdbx_synchrotron_beamline
08ID-1
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2016-04-28
Detector
_diffrn_detector.type
RAYONIX MX-300
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97949
Software
Data reduction
_software.classification
XDS
Data scaling
_software.classification
Aimless (0.5.17)
Phasing
_software.classification
PHASER (2.6.0)
Model building
_software.classification
Coot
Refinement
_software.classification
PHENIX (1.10.1_2155: ???)
General information
Spacegroup name
_symmetry.space_group_name_H-M
C 1 2 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
142.419 93.289 96.722 90.00 122.01 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97949 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
47.720 47.720 1.830
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.800 9.860 1.800
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.057 0.029 0.498
  Rmeas - - -
  Rpim - - -
  Total number of observations - - -
Total number unique
_reflns.number_obs
99190 - -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
15.10 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.9 98.7 100.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
4.2 3.9 4.2
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.999 0.998 0.846

Refinement
PDB entry ID
_entry.id
5T9Y
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-09-09
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
47.7 - 1.800 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1367 / 0.1677
Structure solution method
_refine.pdbx_method_to_determine_struct
SAD