Data quality metrics extracted from 5t5o.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 5T5O at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 22-ID
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
22-ID
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
CCD
Collection date
_diffrn_detector.pdbx_collection_date
2015-10-12
Detector
_diffrn_detector.type
RAYONIX MX300-HS
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
1.0000
Software
Data collection
_software.classification
HKL-3000
Data reduction
_software.classification
HKL-3000
Data scaling
_software.classification
HKL-3000
Phasing
_software.classification
PHASER
Refinement
_software.classification
REFMAC (5.8.0107)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
65.081 187.290 258.387 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
1.00000 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
50.000 50.000 2.800
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
2.750 7.460 2.750
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.113 0.040 0.864
Rmeas
_reflns.pdbx_Rrim_I_all
0.124 - -
Rpim
_reflns.pdbx_Rpim_I_all
0.050 - -
Total number of observations
_reflns.pdbx_number_measured_all
489032 - -
Total number unique
_reflns.number_obs
85387 - -
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
5.50 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
98.4 99.0 88.8
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
5.7 5.4 5.2
CC(1/2)
_reflns_shell.pdbx_CC_half
- 0.996 0.814

Refinement
PDB entry ID
_entry.id
5T5O
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2016-08-31
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
49.4 - 2.750 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2014 / 0.2296