Data quality metrics extracted from 3t5d.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 3T5D at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
SLS BEAMLINE X10SA
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
SLS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
X10SA
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2009-08-14
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.99986
Software
Data collection
_software.classification
PRO (DC)
Data reduction
_software.classification
XDS
Data scaling
_software.classification
XSCALE
Phasing
_software.classification
MOLREP
Refinement
_software.classification
REFMAC (5.2.0019)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 61
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
82.363 82.363 210.598 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.99986 Å

Data quality metricsOverallOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
71.250 3.400
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
3.300 3.300
Rmerge
_reflns_shell.Rmerge_I_obs
- 0.392
  Rmeas - -
  Rpim - -
  Total number of observations - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_all
12079 1007
<I/σ(I)>
_reflns_shell.meanI_over_sigI_obs
- 3.85
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
99.1 98.9
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
8.9 9.1
  CC(1/2) - -

Refinement
PDB entry ID
_entry.id
3T5D
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2011-07-27
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
71.2 - 3.300 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2854 / 0.3183
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
WARNING: no starting model (for MR) given