Data quality metrics extracted from 6t4k.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6T4K at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I03
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I03
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2019-09-15
Detector
_diffrn_detector.type
DECTRIS EIGER X 16M
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.976254
Software
Data reduction
_software.classification
DIALS
Data scaling
_software.classification
Aimless
Phasing
_software.classification
PHASER
Refinement #1
_software.classification
PHENIX (1.16_3549)
Refinement #2
_software.classification
REFMAC (5)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 61 2 2
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
108.317 108.317 108.520 90.0 90.0 120.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97625 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
93.805 93.900 1.920
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
1.890 5.130 1.890
Rmerge
_reflns.pdbx_Rmerge_I_obs
0.054 - -
Rmeas
_reflns.pdbx_Rrim_I_all
0.054 - -
Rpim
_reflns.pdbx_Rpim_I_all
0.006 - -
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
57044 1728 1493
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI
51.10 - -
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
100.0 100.0 99.8
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
78.1 69.1 80.2
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
1.000 1.000 0.867

Refinement
PDB entry ID
_entry.id
6T4K
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2019-10-14
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
93.8 - 1.890 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.1847 / 0.2049
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
6SAL