Data quality metrics extracted from 6t3k.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 6T3K at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
APS BEAMLINE 24-ID-C
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
APS
Beamline
_diffrn_source.pdbx_synchrotron_beamline
24-ID-C
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2013-07-10
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M-F
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97950
Software
Data reduction
_software.classification
XDS (VERSION March 30, 2013)
Data scaling
_software.classification
SCALA (3.3.20)
Phasing
_software.classification
PHASER
Refinement
_software.classification
REFMAC (5.7.0032)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 21 21 21
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
88.659 95.453 224.978 90.0 90.0 90.0
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97950 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
48.460 48.458 3.630
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
3.440 10.880 3.440
Rmerge
_reflns.pdbx_Rsym_value _reflns_shell.Rmerge_I_obs
0.053 0.015 1.508
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.081 - 0.802
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.044 0.011 0.862
  Total number of observations - - -
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
24334 775 3528
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.meanI_over_sigI_obs
17.00 30.60 0.40
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
94.1 87.3 95.0
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
3.3 3.2 3.2
  CC(1/2) - - -

Refinement
PDB entry ID
_entry.id
6T3K
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2019-10-11
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
48.5 - 3.440 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2092 / 0.2571
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
4FAR