Data quality metrics extracted from 7t12.cif.gz by aB_cif2table1 from BUSTER (Global Phasing Ltd.). See also the PDBx/mmCIF dictionary and a MXLIMS-compatible JSON representation.


Experimental information for 7T12 at RCSB, PDBe, PDBj

Experiment
Method
_exptl.method
X-RAY DIFFRACTION
Experimental protocol
_diffrn_radiation.pdbx_diffrn_protocol
SINGLE WAVELENGTH
Source type
_diffrn_source.source
SYNCHROTRON
Source details
_diffrn_source.type
DIAMOND BEAMLINE I02
Synchrotron site
_diffrn_source.pdbx_synchrotron_site
Diamond
Beamline
_diffrn_source.pdbx_synchrotron_beamline
I02
Temperature [K]
_diffrn.ambient_temp
100
Detector technology
_diffrn_detector.detector
PIXEL
Collection date
_diffrn_detector.pdbx_collection_date
2014-12-02
Detector
_diffrn_detector.type
DECTRIS PILATUS 6M-F
Wavelength(s) [Å]
_diffrn_source.pdbx_wavelength_list
0.97945
Software
Data reduction
_software.classification
MOSFLM
Data scaling
_software.classification
Aimless (0.6.3)
Phasing
_software.classification
PHASER (2.8.2)
Refinement
_software.classification
PHENIX (1.14)
General information
Spacegroup name
_symmetry.space_group_name_H-M
P 1 21 1
Unit cell parameters
_cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma}
87.20 151.73 120.42 90.00 105.03 90.00
Wavelength
_diffrn_radiation_wavelength.wavelength
0.97945 Å

Data quality metricsOverallInnerShellOuterShell
Low resolution limit [Å]
_reflns.d_resolution_low _reflns_shell.d_res_low
75.860 75.860 3.080
High resolution limit [Å]
_reflns.d_resolution_high _reflns_shell.d_res_high
3.000 13.080 3.000
Rmerge
_reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs
0.170 0.114 1.208
Rmeas
_reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all
0.193 0.129 1.369
Rpim
_reflns.pdbx_Rpim_I_all _reflns_shell.pdbx_Rpim_I_all
0.088 0.056 0.626
Total number of observations
_reflns.pdbx_number_measured_all _reflns_shell.number_measured_all
295052 3832 21300
Total number unique
_reflns.number_obs _reflns_shell.number_unique_obs
59020 752 4580
<I/σ(I)>
_reflns.pdbx_netI_over_sigmaI _reflns_shell.pdbx_netI_over_sigmaI_obs
5.90 9.20 1.80
Completeness [%]
_reflns.percent_possible_obs _reflns_shell.percent_possible_all
97.7 98.0 97.5
Multiplicity
_reflns.pdbx_redundancy _reflns_shell.pdbx_redundancy
5.0 5.1 4.7
CC(1/2)
_reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half
0.908 0.975 0.282

Refinement
PDB entry ID
_entry.id
7T12
Deposition date
_pdbx_database_status.recvd_initial_deposition_date
2021-12-01
Resolution
_refine.ls_d_res_low _refine.ls_d_res_high
75.9 - 3.000 Å
Rwork/Rfree
_refine.ls_R_factor_R_work _refine.ls_R_factor_R_free
0.2144 / 0.2586
Structure solution method
_refine.pdbx_method_to_determine_struct
MOLECULAR REPLACEMENT
Starting model (for MR)
_refine.pdbx_starting_model
3H47