Experiment | |
---|---|
Method _exptl.method | ELECTRON CRYSTALLOGRAPHY The method used in the experiment. |
Collection date _diffrn_detector.pdbx_collection_date | 2020-10-01 The date of data collection. |
Software | |
Data reduction _software.classification | XDS (Feb 5, 2021) The classification of the program according to its |
Data scaling _software.classification | XSCALE (Feb 5, 2021) The classification of the program according to its |
Phasing _software.classification | PHASER (2.8.3) The classification of the program according to its |
Refinement _software.classification | PHENIX (1.18.2_3874+SVN; Paul D. Adams; pdadams@lbl.gov) The classification of the program according to its |
General information | |
Spacegroup name _symmetry.space_group_name_H-M | P 43 21 2 Hermann-Mauguin space-group symbol. Note that the |
Unit cell parameters _cell.length_{a,b,c} _cell.angle_{alpha,beta,gamma} | 68.55 Unit-cell length a corresponding to the structure reported in 68.55 Unit-cell length b corresponding to the structure reported in 103.53 Unit-cell length c corresponding to the structure reported in 90.0 Unit-cell angle alpha of the reported structure in degrees. 90.0 Unit-cell angle beta of the reported structure in degrees. 90.0 Unit-cell angle gamma of the reported structure in degrees. |
Wavelength _diffrn_radiation_wavelength.wavelength | NA |
Data quality metrics | Overall | OuterShell |
---|---|---|
Low resolution limit [Å] _reflns.d_resolution_low _reflns_shell.d_res_low | 20.000 The largest value in angstroms for the interplanar spacings | 2.100 The highest value in angstroms for the interplanar spacings |
High resolution limit [Å] _reflns.d_resolution_high _reflns_shell.d_res_high | 2.050 The smallest value in angstroms for the interplanar spacings | 2.050 The smallest value in angstroms for the interplanar spacings |
Rmerge _reflns.pdbx_Rmerge_I_obs _reflns_shell.Rmerge_I_obs | 0.228 The R value for merging intensities satisfying the observed | 0.766 The value of Rmerge(I) for reflections classified as 'observed' |
Rmeas _reflns.pdbx_Rrim_I_all _reflns_shell.pdbx_Rrim_I_all | 0.286 The redundancy-independent merging R factor value Rrim, | 0.961 The redundancy-independent merging R factor value Rrim, |
Rpim _reflns.pdbx_Rpim_I_all | 0.128 The precision-indicating merging R factor value Rpim, | - |
Total number of observations | - | - |
Total number unique _reflns.number_obs _reflns_shell.number_unique_obs | 76827 The number of reflections in the REFLN list (not the DIFFRN_REFLN | 5793 The total number of measured reflections classified as 'observed' |
<I/σ(I)> _reflns.pdbx_netI_over_sigmaI _reflns_shell.pdbx_netI_over_sigmaI_obs | 3.80 The mean of the ratio of the intensities to their | 1.57 The mean of the ratio of the intensities to their |
Completeness [%] _reflns.percent_possible_obs _reflns_shell.percent_possible_all | 92.9 The percentage of geometrically possible reflections represented | 93.8 The percentage of geometrically possible reflections represented |
Multiplicity _reflns.pdbx_redundancy | 2.8 Overall redundancy for this data set. | - |
CC(1/2) _reflns.pdbx_CC_half _reflns_shell.pdbx_CC_half | 0.956 The Pearson's correlation coefficient expressed as a decimal value | 0.359 The Pearson's correlation coefficient expressed as a decimal value |
Refinement | |
---|---|
PDB entry ID _entry.id | 7SWB |
Deposition date _pdbx_database_status.recvd_initial_deposition_date | 2021-11-19 |
Resolution _refine.ls_d_res_low _refine.ls_d_res_high | 30.8 - 2.050 Å |
Rwork/Rfree _refine.ls_R_factor_R_work _refine.ls_R_factor_R_free | 0.1914 / 0.2364 |
Structure solution method _refine.pdbx_method_to_determine_struct | MOLECULAR REPLACEMENT |
Starting model (for MR) _refine.pdbx_starting_model | 6CL7 |